beadyallen/MGnifyR: R interface to EBI MGnify metagenomics resource
Utility package to facilitate integration and analysis of EBI MGnify data in R. The package can be used to import microbial data for instance into TreeSummarizedExperiment (TreeSE). In TreeSE format, the data is directly compatible with miaverse framework.
Getting started
Browse package contents
Package details |
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|---|---|
| Bioconductor views | DataImport Infrastructure Metagenomics Microbiome MicrobiomeData |
| Maintainer | |
| License | Artistic-2.0 | file LICENSE |
| Version | 1.3.0 |
| URL | https://github.com/EBI-Metagenomics/MGnifyR |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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