beadyallen/MGnifyR: R interface to EBI MGnify metagenomics resource

Utility package to facilitate integration and analysis of EBI MGnify data in R. The package can be used to import microbial data for instance into TreeSummarizedExperiment (TreeSE). In TreeSE format, the data is directly compatible with miaverse framework.

Getting started

Package details

Bioconductor views DataImport Infrastructure Metagenomics
Maintainer
LicenseArtistic-2.0 | file LICENSE
Version1.3.0
URL https://github.com/EBI-Metagenomics/MGnifyR
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("beadyallen/MGnifyR")
beadyallen/MGnifyR documentation built on Nov. 3, 2024, 4:23 p.m.