Files in beauchamplab/raveio
File-System Toolbox for RAVE Project
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.github/workflows/pkgdown.yaml
.gitignore
CRAN-SUBMISSION
DESCRIPTION
NAMESPACE
NEWS.md
R/.gitignore
R/aaa.R
R/backward-compatibility.R
R/bids.R
R/blackrock-parser.R
R/brainvis.R
R/channel-compose.R
R/class-BlackrockFile.R
R/class-LFP_electrode.R
R/class-LFP_reference.R
R/class-YAEL.R
R/class-electrode-abstract.R
R/class-epoch.R
R/class-metasubject.R
R/class-pipeline_collection.R
R/class-pipeline_tools.R
R/class-preprocess.R
R/class-project.R
R/class-subject.R
R/class-watch-dog.R
R/cmd-3dAlineate.R
R/cmd-aaa.R
R/cmd-ants-preprocess.R
R/cmd-ants-registration.R
R/cmd-dcm2niix.R
R/cmd-flirt.R
R/cmd-niftyreg.R
R/cmd-recon-all.R
R/cmd.R
R/collapse-power.R
R/csv.R
R/csv2.R
R/edf.R
R/filearray.R
R/fst.R
R/hdf5.R
R/hdf5r.R
R/image-preprocess.R
R/json.R
R/matlab.R
R/module-create.R
R/module-pipeline-registry.R
R/nifti.R
R/path.R
R/pipeline-docs.R
R/pipeline-install.R
R/pipeline-knitr.R
R/pipeline-result.R
R/pipeline-run.R
R/pipeline-serializer.R
R/pipeline-tools.R
R/progress.R
R/py-nipy-coreg.R
R/rave-export-repository.R
R/rave-import.R
R/rave-merge-subjects.R
R/rave-meta.R
R/rave-prepare-subjectbare.R
R/rave-prepare-subjectblock.R
R/rave-prepare-subjectphase.R
R/rave-prepare-subjectpower.R
R/rave-prepare-subjectwavelet.R
R/rave-prepare-voltage-with-epoch.R
R/rave-prepare.R
R/rave-raw.R
R/rave-reference.R
R/rave-server.R
R/rave-snippets.R
R/rave-wavelet.R
R/rave2-experimental.R
R/tensor-baseline-power.R
R/tensor-baseline-voltage.R
R/tensor.R
R/threeBrain-instance.R
R/units.R
R/url.R
R/utils-archive.R
R/validate-subject.R
R/validate.R
R/yaml.R
R/zzz.R
README.md
_pkgdown.yml
cran-comments.md
inst/CITATION
inst/WORDLIST
inst/hdf5_installer.sh
inst/module-registry.yaml
inst/python-scripts/nipy-coregistration.py
inst/rave-modules/template/R/aa.R
inst/rave-modules/template/R/aaa-presets.R
inst/rave-modules/template/R/loader.R
inst/rave-modules/template/R/module_html.R
inst/rave-modules/template/R/module_server.R
inst/rave-modules/template/module-ui.html
inst/rave-modules/template/server.R
inst/rave-pipelines/.gitignore
inst/rave-pipelines/template-r/DESCRIPTION
inst/rave-pipelines/template-r/R/shared-scripts.R
inst/rave-pipelines/template-r/common.R
inst/rave-pipelines/template-r/configure.R
inst/rave-pipelines/template-r/debug.R
inst/rave-pipelines/template-r/make-TEMPLATE.R
inst/rave-pipelines/template-r/make-main.R
inst/rave-pipelines/template-r/migrate.R
inst/rave-pipelines/template-r/settings.yaml
inst/rave-pipelines/template-rmd-bare/DESCRIPTION
inst/rave-pipelines/template-rmd-bare/R/shared-scripts.R
inst/rave-pipelines/template-rmd-bare/common.R
inst/rave-pipelines/template-rmd-bare/configure.R
inst/rave-pipelines/template-rmd-bare/debug.R
inst/rave-pipelines/template-rmd-bare/main.Rmd
inst/rave-pipelines/template-rmd-bare/make-main.R
inst/rave-pipelines/template-rmd-bare/migrate.R
inst/rave-pipelines/template-rmd-bare/settings.yaml
inst/rave-pipelines/template-rmd-scheduler/DESCRIPTION
inst/rave-pipelines/template-rmd-scheduler/R/shared-scripts.R
inst/rave-pipelines/template-rmd-scheduler/common.R
inst/rave-pipelines/template-rmd-scheduler/configure.R
inst/rave-pipelines/template-rmd-scheduler/debug.R
inst/rave-pipelines/template-rmd-scheduler/main.Rmd
inst/rave-pipelines/template-rmd-scheduler/make-main.R
inst/rave-pipelines/template-rmd-scheduler/migrate.R
inst/rave-pipelines/template-rmd-scheduler/settings.yaml
inst/rave-pipelines/template-rmd/DESCRIPTION
inst/rave-pipelines/template-rmd/R/shared-scripts.R
inst/rave-pipelines/template-rmd/common.R
inst/rave-pipelines/template-rmd/configure.R
inst/rave-pipelines/template-rmd/debug.R
inst/rave-pipelines/template-rmd/main.Rmd
inst/rave-pipelines/template-rmd/make-main.R
inst/rave-pipelines/template-rmd/migrate.R
inst/rave-pipelines/template-rmd/settings.yaml
inst/rave-server/com.rave.server.plist
inst/rave-server/shiny-server-snippet
inst/rave.yaml
inst/raveio-logo.png
inst/rstudio/templates/project/create_template.dcf
inst/rstudio/templates/project/icon.jpg
inst/shell-templates/afni-3dallineate-coregistration.sh
inst/shell-templates/dcm2niix-mri-ct.sh
inst/shell-templates/fsl-flirt-coregistration.sh
inst/shell-templates/rave-ants-coregistration.R
inst/shell-templates/rave-ants-mri-to-template.R
inst/shell-templates/rave-nifty-coregistration.R
inst/shell-templates/rave-nipy-coregistration.R
inst/shell-templates/recon-all-clinical.sh
inst/shell-templates/recon-all-t1.sh
inst/shell-templates/transform-mat.txt
inst/shell-templates/yael-preprocess.R
inst/shell-templates/yael-preprocess.sh
inst/specifications/blackrock-nev-2.2.yaml
inst/specifications/blackrock-nev-2.3.yaml
inst/specifications/blackrock-nev-3.0.yaml
inst/specifications/blackrock-nsx-2.2.yaml
inst/specifications/blackrock-nsx-2.3.yaml
inst/specifications/blackrock-nsx-3.0.yaml
man/BlackrockFile.Rd
man/ECoGTensor.Rd
man/LFP_electrode.Rd
man/LFP_reference.Rd
man/LazyFST.Rd
man/LazyH5.Rd
man/PipelineCollections.Rd
man/PipelineResult.Rd
man/PipelineTools.Rd
man/RAVEAbstarctElectrode.Rd
man/RAVEEpoch.Rd
man/RAVEMetaSubject.Rd
man/RAVEPreprocessSettings.Rd
man/RAVEProject.Rd
man/RAVESubject.Rd
man/Tensor.Rd
man/YAELProcess.Rd
man/ants_coreg.Rd
man/ants_preprocessing.Rd
man/archive_subject.Rd
man/as_rave_project.Rd
man/as_rave_subject.Rd
man/as_rave_unit.Rd
man/as_yael_process.Rd
man/auto_process_blackrock.Rd
man/backup_file.Rd
man/cache_path.Rd
man/cache_to_filearray.Rd
man/catgl.Rd
man/cmd-external.Rd
man/collapse2.Rd
man/collapse_power.Rd
man/compose_channel.Rd
man/convert-fst.Rd
man/convert_blackrock.Rd
man/convert_electrode_table_to_bids.Rd
man/dir_create2.Rd
man/export_table.Rd
man/find_path.Rd
man/generate_reference.Rd
man/get_projects.Rd
man/get_val2.Rd
man/global_preferences.Rd
man/h5_names.Rd
man/h5_valid.Rd
man/import_electrode_table.Rd
man/install_modules.Rd
man/install_subject.Rd
man/is.blank.Rd
man/is.zerolenth.Rd
man/is_on_cran.Rd
man/is_valid_ish.Rd
man/join_tensors.Rd
man/lapply_async.Rd
man/load_bids_ieeg_header.Rd
man/load_fst_or_h5.Rd
man/load_h5.Rd
man/load_meta2.Rd
man/load_yaml.Rd
man/mgh_to_nii.Rd
man/module_add.Rd
man/module_registry.Rd
man/new_electrode.Rd
man/niftyreg_coreg.Rd
man/pipeline-knitr-markdown.Rd
man/pipeline.Rd
man/pipeline_collection.Rd
man/pipeline_install.Rd
man/pipeline_settings_get_set.Rd
man/power_baseline.Rd
man/progress_with_logger.Rd
man/py_nipy_coreg.Rd
man/rave-pipeline.Rd
man/rave-prepare.Rd
man/rave-raw-validation.Rd
man/rave-server.Rd
man/rave-snippet.Rd
man/rave_brain.Rd
man/rave_command_line_path.Rd
man/rave_directories.Rd
man/rave_export.Rd
man/rave_import.Rd
man/rave_subject_format_conversion.Rd
man/raveio-constants.Rd
man/raveio-option.Rd
man/read-brainvision-eeg.Rd
man/read-write-fst.Rd
man/read_csv_ieeg.Rd
man/read_edf_header.Rd
man/read_edf_signal.Rd
man/read_mat.Rd
man/read_nsx_nev.Rd
man/reexports.Rd
man/safe_read_csv.Rd
man/safe_write_csv.Rd
man/save_h5.Rd
man/save_json.Rd
man/save_meta2.Rd
man/save_yaml.Rd
man/test_hdspeed.Rd
man/time_diff2.Rd
man/url_neurosynth.Rd
man/validate_subject.Rd
man/validate_time_window.Rd
man/voltage_baseline.Rd
man/with_future_parallel.Rd
man/yael_preprocess.Rd
raveio.Rproj
tests/testthat.R
tests/testthat/test-class-subject.R
tests/testthat/test-class-tensor.R
tests/testthat/test-cls_project.R
tests/testthat/test-collapse_power.R
tests/testthat/test-export_table.R
tests/testthat/test-hdf5.R
tests/testthat/test-preprocess-v2.R
tests/testthat/test-rave_data_types.R
