smearPlot: Smear plot

In bedapub/ribiosNGS: Utilities for next-generation sequencing data analysis in ribios

Smear plot

Description

Smear plot

Usage

smearPlot(object, ...)

## S4 method for signature 'EdgeResult'
smearPlot(
  object,
  contrast = NULL,
  freeRelation = FALSE,
  xlab = "Average logCPM",
  ylab = "logFC",
  pch = 19,
  cex = 0.2,
  smearWidth = 0.5,
  panel.first = grid(),
  smooth.scatter = FALSE,
  lowess = FALSE,
  multipage = FALSE,
  ...
)

Arguments

object	An object
...	Other parameters
contrast	Character, contrast of interest
freeRelation	Logical
xlab	Character
ylab	Character
pch	Character or integer
cex	Numeric
smearWidth	Numeric
panel.first	Grid
smooth.scatter	Logical
lowess	Logical
multipage	Logical

Methods (by class)

• smearPlot(EdgeResult): Method for EdgeResult

bedapub/ribiosNGS documentation built on Feb. 10, 2025, 12:34 a.m.