saveData: Save data created during the simulation

Description Usage Arguments Value Author(s) Examples

View source: R/methylInheritanceSimInternalMethods.R

Description

Save data created during the simulation.

Usage

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saveData(pathOut, extension, gRanges, methylData, methUnit, diffData,
  saveGRanges, saveMethylKit, runAnalysis)

Arguments

pathOut

a string of character, the path where the files are saved.

extension

a string of character representing the extension that will be given to the saved files.

gRanges

a list of methylRawList TODO

methylData

a list of methylRawList, the results of the normalization of the coverage.

methUnit

a list of methylBase, the results of the base filtering for all samples.

diffData

a list of methylDiff, the results of the calculation of differential methylation statistics.

saveGRanges

a logical, when true, files containing GRangeaList are saved.

saveMethylKit

a logical, when TRUE, files methylRawList object are saved.

runAnalysis

a logical, when TRUE, two files related to the analysis are saved.

Value

0 indicating that the function has been successful.

Author(s)

Pascal Belleau, Astrid Deschenes

Examples

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## TODO

belleau/methylInheritanceSim documentation built on April 1, 2020, 2:43 p.m.