celfile-utils: Reads cel files and return an error if a file is not read

In benilton/crlmm-release: Genotype Calling (CRLMM) and Copy Number Analysis tool for Affymetrix SNP 5.0 and 6.0 and Illumina arrays.

Description

Reads cel files and return an error if a file is not read

Usage

validCEL(celfiles)
celDates(celfiles)

Arguments

celfiles

vector of cel file names to read

Value

Returns a message that cel files were successfully read, or an error if there were problems reading the cel files.

Author(s)

R. Scharpf

See Also

read.celfile.header, POSIXt, read.celfile

Examples

library(oligoClasses)
if(require(hapmapsnp6)){
  path <- system.file("celFiles", package="hapmapsnp6")
  cels <- list.celfiles(path, full.names=TRUE)
  validCEL(cels)
  celDates(cels)
}

benilton/crlmm-release documentation built on May 12, 2019, 10:59 a.m.