Man pages for bentaylor1/spatsurv
Bayesian Spatial Survival Analysis with Parametric Proportional Hazards Models

allocateallocate function
alphaalpha function
BB function
basehazardbasehazard function
basehazard.basehazardspecbasehazard.basehazardspec function
baseHazSTbaseHazST function
baselinehazardbaselinehazard function
betapriorGaussbetapriorGauss function
boxplotRiskboxplotRisk function
Bspline.constructBspline.construct function
BsplineHazBsplineHaz function
checkSurvivalDatacheckSurvivalData function
circulantcirculant function
circulantijcirculantij function
circulant.matrixcirculant.matrix function
circulant.numericcirculant.numeric function
covmodelcovmodel function
CSplotCSplot function
cumbasehazardcumbasehazard function
cumbasehazard.basehazardspeccumbasehazard.basehazardspec function
cumulativeBspline.constructcumulativeBspline.construct function
density_PPdensity_PP function
densityquantiledensityquantile function
densityquantile.basehazardspecdensityquantile.basehazardspec function
densityquantile_PPdensityquantile_PP function
derivindepGaussianpriorderivindepGaussianprior function
derivindepGaussianpriorSTderivindepGaussianpriorST function
derivpsplinepriorderivpsplineprior function
distinfodistinfo function
distinfo.basehazardspecdistinfo.basehazardspec function
estimateYestimateY function
etapriorGaussetapriorGauss function
Et_PPEt_PP function
EvalCovEvalCov function
ExponentialCovFctExponentialCovFct function
exponentialHazexponentialHaz function
FFTgridFFTgrid function
fixedparsfixedpars function
fixmatrixfixmatrix function
frailtylag1frailtylag1 function
fsLondon Fire Brigade property
fstimesLondon Fire Brigade response times to dwelling fires, 2009
gamma2riskgamma2risk function
GammafromYGammafromY function
GammaFromY_SPDEGammaFromY_SPDE function
gencensgencens function
getBackgroundgetBackground function
getbbgetbb function
getBbasisgetBbasis function
getcovgetcov function
getgrdgetgrd function
getGridgetGrid function
getlenetagetleneta function
getOptCellwidthgetOptCellwidth function
getparrangesgetparranges function
getsurvdatagetsurvdata function
gompertzHazgompertzHaz function
gradbasehazardgradbasehazard function
gradbasehazard.basehazardspecgradbasehazard.basehazardspec function
gradcumbasehazardgradcumbasehazard function
gradcumbasehazard.basehazardspecgradcumbasehazard.basehazardspec function
grid2spdfgrid2spdf function
grid2spixgrid2spix function
grid2sptsgrid2spts function
gridYgridY function
gridY_polygonalgridY_polygonal function
guess_tguess_t function
hasNextgeneric hasNext method
hasNext.iterhasNext.iter function
hazardexceedancehazardexceedance function
hazardparshazardpars function
hazard_PPhazard_PP function
hessbasehazardhessbasehazard function
hessbasehazard.basehazardspechessbasehazard.basehazardspec function
hesscumbasehazardhesscumbasehazard function
hesscumbasehazard.basehazardspechesscumbasehazard.basehazardspec function
imputationModelimputationModel function
IndependentIndependent function
indepGaussianpriorindepGaussianprior function
indepGaussianpriorSTindepGaussianpriorST function
inference.controlinference.control function
invtransformweibullinvtransformweibull function
is.burninis this a burn-in iteration?
is.retaindo we retain this iteration?
iterationiteration number
logPosteriorlogPosterior function
logPosterior_griddedlogPosterior_gridded function
logPosterior_polygonallogPosterior_polygonal function
logPosterior_SPDElogPosterior_SPDE function
loop.mcmcloop over an iterator
makehamHazmakehamHaz function
maxlikparamPHsurvmaxlikparamPHsurv function
MCEMCE function
mcmcLoopiterator for MCMC loops
mcmcparsmcmcpars function
mcmcPriorsmcmcPriors function
mcmcProgressNonenull progress monitor
mcmcProgressPrintprinting progress monitor
mcmcProgressTextBartext bar progress monitor
midptsmidpts function
neighLocsneighLocs function
neighOrderneighOrder function
nextStepnext step of an MCMC chain
NonSpatialLogLikelihood_or_gradientNonSpatialLogLikelihood_or_gradient function
omegapriorGaussomegapriorGauss function
omegapriorGaussSTomegapriorGaussST function
optifixoptifix function
plotsurvplotsurv function
polyaddpolyadd function
polymultpolymult function
posteriorcovposteriorcov function
predict.mcmcspatsurvpredict.mcmcspatsurv function
print.mcmcprint.mcmc function
print.mcmcspatsurvprint.mcmcspatsurv function
print.mlspatsurvprint.mlspatsurv function
print.textSummaryprint.textSummary function
priorposteriorpriorposterior function
proposalVarianceproposalVariance function
proposalVariance_griddedproposalVariance_gridded function
proposalVariance_polygonalproposalVariance_polygonal function
proposalVariance_SPDEproposalVariance_SPDE function
PsplineHazPsplineHaz function
psplinepriorpsplineprior function
psplineRWpriorpsplineRWprior function
QuadApproxQuadApprox function
quantile.mcmcspatsurvquantile.mcmcspatsurv function
quantile.mlspatsurvquantile.mlspatsurv function
randomparsrandompars function
reconstruct.bsreconstruct.bs function
reconstruct.bs.coxphreconstruct.bs.coxph function
reconstruct.bs.mcmcspatsurvreconstruct.bs.mcmcspatsurv function
resetLoopreset iterator
residuals.mcmcspatsurvresuiduals.mcmcspatsurv function
setTxtProgressBar2set the progress bar
setupHazardsetupHazard function
setupPrecMatStructsetupPrecMatStruct function
showGridshowGrid function
simsurvsimsurv function
spatialparsspatialpars function
spatsurv-packagespatsurv
spatsurvVignettespatsurvVignette function
SPDESPDE function
SPDEprecSPDEprec function
SpikedExponentialCovFctSpikedExponentialCovFct function
spplot1spplot1 function
spplot_comparespplot_compare function
SummariseSummarise function
summary.mcmcsummary.mcmc function
summary.mcmcspatsurvsummary.mcmcspatsurv function
surv3dSpatial Survival Plot in 3D
survival_PPsurvival_PP function
survspatsurvspat function
survspatNSsurvspatNS function
textSummarytextSummary function
timevaryingPLtimevaryingPL function
tpowHaztpowHaz function
transformweibulltransformweibull function
txtProgressBar2A text progress bar with label
urlTemplateurlTemplate function
vcov.mcmcspatsurvvcov.mcmcspatsurv function
vcov.mlspatsurvvcov.mlspatsurv function
weibullHazweibullHaz function
YfromGammaYfromGamma function
YFromGamma_SPDEYFromGamma_SPDE function
bentaylor1/spatsurv documentation built on May 11, 2017, 7:14 a.m.