gsaWilcoxSurv-methods: General method for performing a Gene Set Analysis (GSA),...

In bernau/survHDExtra: Addtitional Features for package survHD

Description

Performs gene selection for the following signatures:

Methods

gmt = "gsagenesets",X = "missing", y = "missing", genenames = "character", statistics="missing"

signature 1

gmt = "gsagenesets",X = "matrix", y = "Surv", genenames = "missing", statistics="missing"

signature 2

gmt = "gsagenesets",X = "ExpressionSet", y = "Surv", genenames = "missing", statistics="missing"

signature 3

gmt = "gsagenesets",X = "data.frame", y = "Surv", genenames = "missing", statistics="missing"

signature 4

gmt = "list",X = "missing", y = "missing", genenames = "character", statistics="numeric"

signature 5

gmt = "list",X = "ANY", y = "Surv", genenames="missing", statistics="missing"

signature 6

For further argument and output information, consult gsaWilcoxSurv.

bernau/survHDExtra documentation built on May 12, 2019, 4:22 p.m.