ImputeSAVER: Use SAVER

Description Usage Arguments Value See Also

View source: R/Impute.R

Description

ImputeSAVER uses the SAVER package for dropout imputation

Usage

1
ImputeSAVER(data, cores, try.mean = FALSE, write = FALSE)

Arguments

data

matrix with entries equal to zero to be imputed, normalized (genes as rows and samples as columns)

cores

integer; number of cores to use

try.mean

logical; whether to additionally use mean gene expression as prediction

write

logical; should a file with the imputation results be written?

Value

matrix; imputation results from SAVER

See Also

saver


beyergroup/ADImpute documentation built on Dec. 19, 2021, 8:48 a.m.