runPipeline: x
In bhklab/MetaGx: R package for meta-analysis of breast cancer gene expressions
Usage
1
runPipeline(sbt.model = c("scmgene", "scmod2", "scmod1", "pam50", "ssp2006", "ssp2003"), resdir = "cache", probegene.method, remove.duplicates = TRUE, topvar.genes = 1000, duplicates.cor = 0.975, datasets, nthread = 1, verbose = TRUE)
Arguments
sbt.model
resdir
probegene.method
remove.duplicates
topvar.genes
duplicates.cor
datasets
nthread
verbose
Examples
1
2
3
##---- Should be DIRECTLY executable !! ----
##-- ==> Define data, use random,
##-- or do help(data=index) for the standard data sets.
bhklab/MetaGx documentation built on May 12, 2019, 8:25 p.m.
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Usage
1 | runPipeline(sbt.model = c("scmgene", "scmod2", "scmod1", "pam50", "ssp2006", "ssp2003"), resdir = "cache", probegene.method, remove.duplicates = TRUE, topvar.genes = 1000, duplicates.cor = 0.975, datasets, nthread = 1, verbose = TRUE)
|
Arguments
sbt.model |
|
resdir |
|
probegene.method |
|
remove.duplicates |
|
topvar.genes |
|
duplicates.cor |
|
datasets |
|
nthread |
|
verbose |
Examples
1 2 3 | ##---- Should be DIRECTLY executable !! ----
##-- ==> Define data, use random,
##-- or do help(data=index) for the standard data sets.
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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