getCytoscapeLayout: Get layout for a cytoscape network
In bhuvad/restools: Research tools for data science projects
View source: R/cytoscapeAccessoryFunctions.R
getCytoscapeLayout R Documentation
Get layout for a cytoscape network
Description
This function retrieves the layout of an active cytoscape network using the
'RCy3' package. The layout is retrieved as node coordinates.
Usage
getCytoscapeLayout(normalise = TRUE)
Arguments
normalise
a logical, indicating whether coordinates should be
normalised using the z-transform or not.
Value
a data.frame with the x and y coordinates of nodes. Node names are
stored as rownames of the data.frame.
Examples
# getCytoscapeLayout()
bhuvad/restools documentation built on June 16, 2024, 12:44 a.m.
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View source: R/cytoscapeAccessoryFunctions.R
| getCytoscapeLayout | R Documentation |
Get layout for a cytoscape network
Description
This function retrieves the layout of an active cytoscape network using the 'RCy3' package. The layout is retrieved as node coordinates.
Usage
getCytoscapeLayout(normalise = TRUE)
Arguments
normalise |
a logical, indicating whether coordinates should be normalised using the z-transform or not. |
Value
a data.frame with the x and y coordinates of nodes. Node names are stored as rownames of the data.frame.
Examples
# getCytoscapeLayout()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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