biobakery/Maaslin2: "Multivariable Association Discovery in Population-scale Meta-omics Studies"

MaAsLin2 is comprehensive R package for efficiently determining multivariable association between clinical metadata and microbial meta'omic features. MaAsLin2 relies on general linear models to accommodate most modern epidemiological study designs, including cross-sectional and longitudinal, and offers a variety of data exploration, normalization, and transformation methods. MaAsLin2 is the next generation of MaAsLin.

Getting started

Package details

Bioconductor views Metagenomics Microbiome Normalization Software
Maintainer
LicenseMIT + file LICENSE
Version1.7.3
URL http://huttenhower.sph.harvard.edu/maaslin2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("biobakery/Maaslin2")
biobakery/Maaslin2 documentation built on June 13, 2022, 2:12 p.m.