outside: Segmentation of the background of 3D images based on classes
In bioimaginggroup/bioimagetools: Tools for Microscopy Imaging

outside

R Documentation

Segmentation of the background of 3D images based on classes

Segmentation of the background of 3D images based on classes

outside(img, what, blobsize = 1)

`img`	is a 3d array representing an image.
`what`	is an integer of the class of the background.
`blobsize`	is an integer, representing the minimal diameter for bridges from the outside. E.g., a blobsize=3 allows for holes of size 2*(blobsize-1)=4 in the edge of the object.