transform_asinh: Transform data using asinh

In biosurf/cyCombine: Robust integration of single-cell cytometry datasets within and across technologies

Transform data using asinh

Description

Inverse sine transformation of a tibble. This function can also de-randomize data.

Usage

transform_asinh(
  df,
  markers = NULL,
  cofactor = 5,
  derand = TRUE,
  .keep = FALSE,
  reverse = FALSE
)

Arguments

df	The tibble to transform
markers	The markers to transform on
cofactor	The cofactor to use when transforming
derand	Derandomize. Should be TRUE for CyTOF data, otherwise FALSE.
.keep	Keep all channels. If FALSE, channels that are not transformed are removed
reverse	Reverses the asinh transformation if TRUE

See Also

Other dataprep: compile_fcs(), convert_flowset(), prepare_data()

Examples

## Not run: 
uncorrected <- df %>%
  transform_asinh(markers = markers)
  
## End(Not run)

biosurf/cyCombine documentation built on May 23, 2024, 4:07 a.m.