triangle_creation_score: Triangle creation score
In blasern/TESEA: Topological Edge Set Enrichment Analysis

Description Usage Arguments

View source: R/triangle_score.R

Calculate the difference between the proportions of triangles an edge creates in the exposed group versus the control group. This is an alternative to calEdgeCorScore from the ESEA package to use in TESEA.Main.

1 2	triangle_creation_score(dataset, class.labels, controlcharacter, edgesbackground, return_p = TRUE, metric = "angular")

`dataset`	A marix of gene expression data whose row names are genes symbols and whose column names are samples.
`class.labels`	A vector of binary labels.
`controlcharacter`	A character string of control sample label.
`edgesbackground`	A marix which deposits the data of background set of edges.
`return_p`	Should p value attributes be calculated.
`metric`	The distance metric to use. Defaults to "angular".