PlotTESEAPathwayGraph: Plot the pathway-result network diagram
In blasern/TESEA: Topological Edge Set Enrichment Analysis

Description Usage Arguments Author(s)

Plot the pathway-result network diagram

PlotTESEAPathwayGraph(graph, margin = 0, vertex.label.cex = 0.6,
  vertex.label.font = 1, vertex.size = 8, vertex.size2 = 6,
  vertex.shape = "rectangle", layout = igraph::layout.fruchterman.reingold,
  vertex.label.color = "black", edge.color = "dimgray",
  vertex.color = "#C1FFC1", vertex.frame.color = "dimgray", axes = FALSE,
  xlab = "", ylab = "", sub = NULL, main = NULL, ...)

`graph`	A dataframe of pathway result obtained from the `TESEA.Main` function.
`margin`	A numeric. The value is usually between -0.5 and 0.5, which is able to zoom in or out a pathway graph. The default is 0.
`vertex.label.cex`	A numeric vector of node label size.
`vertex.label.font`	A numeric vector of label font.
`vertex.size`	A numeric vector of Node size. See plot.igraph
`vertex.size2`	A numeric vector of Node size.
`vertex.shape`	A vector of node shape. The default is graphics_type.
`layout`	A matrix of x-y coordinates with two dims. Determine the placement of the nodes for drawing a graph.The default is layout.random.
`vertex.label.color`	A vector of node label colors. The default is black.
`edge.color`	A vector of edge color. The default is dimgray.
`vertex.color`	A vector of node colors. The default is the KEGG node color.
`vertex.frame.color`	A vector of node frame color. The default is dimgray.
`axes`	A logical. whether to plot axes. The default is FALSE.
`xlab`	A character string. The label of the horizontal axis. The default is the empty string.
`ylab`	A character string. The label of the vertical axis. The default is the empty string.
`sub`	A character string of subtitle.
`main`	A character string of main title.
`...`	The arguments passed to or from methods. See plot.igraph and see plot.