API for bletcher/linkedModels
Link movement, growth, and survival models

Global functions
addNPasses Man page Source code
addRawCounts Source code
addSurvivals Man page Source code
addxxxxN Source code
adjustCounts Source code Source code
adjustCounts_allFish Source code
cleanData Man page Source code Source code
createMatrices Source code
crossValidate Man page Source code Source code
get.dim Source code
getCoreData Man page Source code Source code
getCountOfUntagged Source code
getCounts_AllFish Source code
getDensities Man page Source code
getDensities_allFish Source code
getIndVars Source code
getNBetas Source code
getPrediction Man page Source code
getPredictionSigma Man page Source code
getPredictionSigma_Counts Source code
getPropOverlap0Betas Source code
getPropSampled Man page Source code
getRMSE Man page Source code
getRMSE_Nimble Source code
getRawCounts Source code
getSites Man page Source code Source code
getYOYCutoffs Man page Source code Source code
gr Source code
hello Man page
mergeSites Man page Source code Source code
minimalData Man page Source code Source code
multiplot Source code
plotBetas Source code
plotBetasATS_Nimble Source code
plotBetasBNT_Nimble Source code
plotBetas_Nimble Source code
plotInt Source code
plotInt_Nimble Source code
plotPred Man page Source code
plotPredMeans Source code
plotSigma Source code
plotSigmaBetas Source code
plotSigmaBetasATS_Nimble Source code
plotSigmaBetasBNT_Nimble Source code
plotSigmaBetas_Nimble Source code
plotSigmaInt_Nimble Source code
populate Source code
prepareDataForJags_Nimble Source code
process.output Source code
projectSizes Source code
removeFishWithManyIntermediateNAs Source code Source code
removeLowAbundanceRivers Source code
removeUnsampledRows Source code
runDetectionModel Man page Source code
runGrowthModel Man page Source code Source code
runGrowthModel_Nimble Source code Source code
samplesPlot Source code
scale_colour_Publication Source code
scale_fill_Publication Source code
summarizeLens Source code
theme_publication Source code
updateSimData Source code
bletcher/linkedModels documentation built on Aug. 16, 2018, 8:52 a.m.