annotations: Oncotator annotations for SNVs on chromosome 12 of a PDX...
In bmannakee/mapexr: Sensitive and Specific Filtering of Genetic Variants in Xenograft and Primary Tumors
Description
Oncotator annotations for SNVs on chromosome 12 of a PDX sample
Usage
1
Format
A data frame with 13055 rows and 6 variables
- gene
Gene names (HUGO symbol)
- chrom
The chromosome the variant is on
- loc
The genomic coordinates of the SNV
- variant_classification
The oncotator annotation for the type of mutation (i.e. Missense_Mutation)
- ref
The reference allele
- alt
The alternate allele
bmannakee/mapexr documentation built on May 5, 2019, 12:27 p.m.
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Description
Oncotator annotations for SNVs on chromosome 12 of a PDX sample
Usage
1 |
Format
A data frame with 13055 rows and 6 variables
- gene
Gene names (HUGO symbol)
- chrom
The chromosome the variant is on
- loc
The genomic coordinates of the SNV
- variant_classification
The oncotator annotation for the type of mutation (i.e. Missense_Mutation)
- ref
The reference allele
- alt
The alternate allele
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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