variants: MuTect1 SNV calls for Chromosome 12 of a PDX sample
In bmannakee/mapexr: Sensitive and Specific Filtering of Genetic Variants in Xenograft and Primary Tumors
Description
MuTect1 SNV calls for Chromosome 12 of a PDX sample
Usage
1
Format
A data frame with 78505 rows and 6 variables
- chrom
The chromosome the variant is on
- loc
The genomic coordinates of the SNV
- ref
The reference allele
- alt
The alternate allele
- vaf
Frequency of the alternate allele
- judgement
The judgement of MuTect1 on the variant (KEEP/REJECT)
bmannakee/mapexr documentation built on May 5, 2019, 12:27 p.m.
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Description
MuTect1 SNV calls for Chromosome 12 of a PDX sample
Usage
1 |
Format
A data frame with 78505 rows and 6 variables
- chrom
The chromosome the variant is on
- loc
The genomic coordinates of the SNV
- ref
The reference allele
- alt
The alternate allele
- vaf
Frequency of the alternate allele
- judgement
The judgement of MuTect1 on the variant (KEEP/REJECT)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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