Man pages for boxiangliu/locuscomparer
locuscomparer: Visualization of GWAS-QTL Colocalization Events
| add_label | Add a column of SNP labels to input data.frame |
| assign_color | Assign color to each SNP according to LD. |
| get_lead_snp | Get the lead SNP from the list of SNPs in input data.frame... |
| get_position | Append two columns, chromosome (chr) and position (pos), to... |
| hello | Hello, World! |
| locuscompare | Make a locuscompare plot. |
| make_combined_plot | Generated a combined plot with two locuszoom plots and a... |
| make_locuszoom | Make a locuszoom plot. Details see http://locuszoom.org/. |
| make_scatterplot | Make a scatter plot (called the LocusCompare plot). Each axis... |
| read_metal | Read association summary statistics from file and append... |
| retrieve_LD | Retrive SNP pairwise LD from database. SNP pairwise lD are... |
