get_position: Append two columns, chromosome (chr) and position (pos), to...
In boxiangliu/locuscomparer: locuscomparer: Visualization of GWAS-QTL Colocalization Events
get_position R Documentation
Append two columns, chromosome (chr) and position (pos), to the input data.frame.
Description
Append two columns, chromosome (chr) and position (pos), to the input data.frame.
Usage
get_position(x, genome = c("hg19", "hg38"))
Arguments
x
(data.frame) Input data.frame.
genome
(string, optional) Genome assembly, either 'hg19' or 'hg38'. Default: 'hg19'.
Examples
in_fn = system.file('extdata', 'gwas.tsv', package = 'locuscomparer')
d1 = read_metal(in_fn, marker_col = 'rsid', pval_col = 'pval')
get_position(d1, genome)
boxiangliu/locuscomparer documentation built on Nov. 27, 2022, 7:26 a.m.
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| get_position | R Documentation |
Append two columns, chromosome (chr) and position (pos), to the input data.frame.
Description
Append two columns, chromosome (chr) and position (pos), to the input data.frame.
Usage
get_position(x, genome = c("hg19", "hg38"))
Arguments
x |
(data.frame) Input data.frame. |
genome |
(string, optional) Genome assembly, either 'hg19' or 'hg38'. Default: 'hg19'. |
Examples
in_fn = system.file('extdata', 'gwas.tsv', package = 'locuscomparer')
d1 = read_metal(in_fn, marker_col = 'rsid', pval_col = 'pval')
get_position(d1, genome)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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