API for brendanf/inferrnal
Interface to Call Programs from Infernal RNA Covariance Model Package
| Global functions | |
|---|---|
| StockholmAAMultipleAlignment | Man page Source code |
| StockholmDNAMultipleAlignment | Man page Source code |
| StockholmMultipleAlignment-class | Man page |
| StockholmRNAMultipleAlignment | Man page Source code |
| add_gc | Source code |
| add_gf | Source code |
| add_gr | Source code |
| add_gs | Source code |
| add_sequences | Source code |
| arg2opt | Source code |
| check_null_args | Source code |
| check_stockholm_msa | Source code |
| cm_5_8S | Man page Source code |
| cmalign | Man page Source code |
| cmbuild | Man page Source code |
| cmcalibrate | Man page Source code |
| cmsearch | Man page Source code |
| count_opt | Source code |
| flag_opt | Source code |
| float_opt | Source code |
| fraction_opt | Source code |
| infile_opt | Source code |
| integer_opt | Source code |
| multiflag_opt | Source code |
| nonmissing_warning | Source code |
| nonneg_float_opt | Source code |
| parse_stockholm_msa_chunk | Source code |
| percent_opt | Source code |
| read_stockholm_msa | Man page Source code |
| sample_rRNA_5_8S | Man page Source code |
| sample_rRNA_fasta | Man page Source code |
| sample_rRNA_stk | Man page Source code |
| show_stockholm_msa | Source code |
| stk_5_8S | Man page Source code |
| string_opt | Source code |
| writeStockholmMultipleAlignment | Man page Source code |
