simulate_single_molecule_trap_data | R Documentation |
Simulate Single Molecule Trap Data
simulate_single_molecule_trap_data(
n,
hz,
signal_to_noise,
baseline,
displacement,
pi_release,
adp_release,
atp_binding,
time_off
)
n |
an integer. The number of events. |
hz |
an integer. Sampling frequency to simulate in Hz. |
signal_to_noise |
an integer. Ratio of the signal to noise. |
baseline |
a list. Containing mean and sd describing the baseline noise. |
displacement |
a list. Containing mean and sd describing the displacement distribution (gaussian). |
pi_release |
a list. Containing the rate, lower, and upper limits (in milliseconds) to the time on distribution (exponential). |
adp_release |
a list. Containing the rate, lower, and upper limits (in milliseconds) to the time off distribution (exponential). |
a list containing a vector of simulated data and plots of the distributions from 10000 random draws.
simulate_single_molecule_trap_data(n = 100,
signal_to_noise = 2.5,
hz = 5000,
baseline = list(mean = 0, sd = 8),
time_off = list(rate = 50, lower = 15, upper = 5000),
displacement = list(mean = 6, sd = 8),
pi_release = list(rate = 200, lower = 0, upper = 1500, occurs = 'after'),
adp_release = list(rate = 20, lower = 0, upper = 1000, hitch = 2),
atp_binding = list(rate = 1000, lower = 0, upper = 10000, hitch = 2) )
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