corRMatern: Matern Spatial Correlation Structure

In brian-j-smith/ramps: Bayesian Geostatistical Modeling with RAMPS

Matern Spatial Correlation Structure

Description

This function is a constructor for the 'corRMatern' class, representing a Matern spatial correlation structure. Letting r denote the range, and s the scale, the correlation between two observations a distance d apart is 1/(2^(s-1)*gamma(s))*(d/r)^s*besselK(d/r, s).

Usage

   corRMatern(value = numeric(0), form = ~ 1,
              metric = c("euclidean", "maximum", "manhattan", "haversine"),
              radius = 3956)

Arguments

value	optional numeric vector of two parameter values for the Matern correlation structure, corresponding to the “range” and “scale”. The range parameter value must be greater than zero, and the scale in the interval (0, 2]. Defaults to numeric(0), which results in a range of 90% of the minimum distance and a scale of 0.5 being assigned to the parameter when object is initialized.
form	one-sided formula of the form ~ S1+...+Sp, specifying spatial covariates S1 through Sp. Defaults to ~ 1, which corresponds to using the order of the observations in the data as a covariate.
metric	optional character string specifying the distance metric to be used. The currently available options are "euclidean" for the root sum-of-squares of distances; "maximum" for the maximum difference; "manhattan" for the sum of the absolute differences; and "haversine" for the great-circle distance (miles) between longitude/latitude coordinates. Partial matching of arguments is used, so only the first three characters need to be provided. Defaults to "euclidean".
radius	radius to be used in the haversine formula for great-circle distance. Defaults to the Earth's radius of 3,956 miles.

Value

Object of class 'corRMatern', also inheriting from class 'corRSpatial', representing a Matern spatial correlation structure.

Note

When "haversine" is used as the distance metric, longitude and latitude coordinates must be given as the first and second covariates, respectively, in the formula specification for the form argument.

Author(s)

Brian Smith [e-mail]

References

Cressie, N.A.C. (1993), “Statistics for Spatial Data”, J. Wiley & Sons.

Venables, W.N. and Ripley, B.D. (1997) “Modern Applied Statistics with S-plus”, 2nd Edition, Springer-Verlag.

See Also

corRClasses

Examples

sp1 <- corRMatern(form = ~ x + y + z)

spatDat <- data.frame(x = (0:4)/4, y = (0:4)/4)

cs1Matern <- corRMatern(c(1, 1), form = ~ x + y)
cs1Matern <- Initialize(cs1Matern, spatDat)
corMatrix(cs1Matern)

cs2Matern <- corRMatern(c(1, 1), form = ~ x + y, metric = "man")
cs2Matern <- Initialize(cs2Matern, spatDat)
corMatrix(cs2Matern)

brian-j-smith/ramps documentation built on Feb. 2, 2023, 5:54 a.m.