as.data.frame.softermax: Coerce 'SoftMax Pro' data into data frames

Description Usage Arguments Value Examples

View source: R/as.data.frame.softermax.R

Description

Coerce 'SoftMax Pro' data into data frames

Usage

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
## S3 method for class 'softermax'
as.data.frame(x, row.names = NULL, optional = FALSE,
  experimentsAsFactors = TRUE, platesAsFactors = TRUE,
  readModesAsFactors = TRUE, wellsAsFactors = TRUE, ...)

## S3 method for class 'softermax.experiment'
as.data.frame(x, row.names = NULL,
  optional = FALSE, experimentsAsFactors = TRUE, platesAsFactors = TRUE,
  readModesAsFactors = TRUE, wellsAsFactors = TRUE, ...)

## S3 method for class 'softermax.plate'
as.data.frame(x, row.names = NULL,
  optional = FALSE, platesAsFactors = TRUE, readModesAsFactors = TRUE,
  wellsAsFactors = TRUE, ...)

## S3 method for class 'softermax.wavelength'
as.data.frame(x, row.names = NULL,
  optional = FALSE, wellsAsFactors = TRUE, ...)

## S3 method for class 'softermax.well'
as.data.frame(x, row.names = NULL,
  optional = FALSE, ...)

Arguments

x

A softermax object

row.names

NULL or a character vector giving the row names for the data frame. Missing values are not allowed.

optional

logical. If TRUE, setting row names and converting column names (to syntactic names: see make.names) is optional. Note that all of R's base package as.data.frame() methods use optional only for column names treatment, basically with the meaning of data.frame(*, check.names = !optional).

experimentsAsFactors

Logical value indicating whether or not experiment names should be treated as factors (default: TRUE)

platesAsFactors

Logical value indicating whether or not plate names should be treated as factors (default: TRUE)

readModesAsFactors

Logical value indicating whether or not read modes should be treated as factors (default: TRUE)

wellsAsFactors

Logical value indicating whether or not well names (e.g., "H5") should be treated as factors (default: TRUE)

...

Additional parameters (not used)

Value

A data frame

Examples

1
2
3
4
## Not run: 
d <- as.data.frame(read_softmax_xml("myfile.xml"))

## End(Not run)

briandconnelly/softermax documentation built on Sept. 23, 2017, 8:09 p.m.