softermax: Create softermax Objects
In briandconnelly/softermax: Read Exported Data from 'SoftMax Pro'

Description Usage Arguments Value See Also

softermax creates a softermax object

softermax.experiment creates a softermax.experiment object, which stores information about an experiment

softermax.plate creates a softermax.plate object, which stores information about a plate

softermax.note creates a softermax.note object, which stores information about a note

softermax.wavelength creates a softermax.wavelength object, which stores information about a read at a particular wavelength

softermax.well creates a softermax.well object, which stores information about a well in a microtiter plate

softermax.template creates a softermax.template object, which stores layout information for a microtiter plate

softermax(experiments = list(), attrs = list())

softermax.experiment(name, plates = list(), notes = list(),
  attrs = list())

softermax.plate(name, wavelengths = list(), temperatures = NULL,
  attrs = list())

softermax.note(name, text_data = list(), attrs = list())

softermax.wavelength(wavelength, wells = list(), attrs = list())

softermax.well(name, times, values, attrs = list())

softermax.template(x, wellsAsFactors = TRUE, groupsAsFactors = TRUE,
  typesAsFactors = TRUE)

`experiments`	A list of `softermax.experiment` objects
`attrs`	A list of attributes relevant to the object
`name`	Name describing the experiment/plate/name/etc.
`plates`	A list of `softermax.plate` objects
`notes`	A list of `softermax.note` objects
`wavelengths`	A list of `softermax.wavelength` objects
`temperatures`	Temperature(s) at which plate was read (default: `NULL`)
`text_data`	A list of strings
`wavelength`	An integer specifying a read wavelength
`wells`	A list of `softermax.well` objects
`times`	A vector of read times (numeric)
`values`	A vector of read values (numeric)
`x`	A data frame
`wellsAsFactors`	A logical value indicating whether well names (e.g., "A6") should be treated as factors or not (default: `TRUE`)
`groupsAsFactors`	A logical value indicating whether well groups should be treated as factors or not (default: `TRUE`)
`typesAsFactors`	A logical value indicating whether well group types should be treated as factors or not (default: `TRUE`)