marker_database: scRNAseq marker database
In brickmanlab/commonR: Helper scripts used in Brickman Lab
Description
Usage
Format
Details
Description
This is a marker database of all external scRNAseq experiments in the scViz app. LFC > 1 and padj < 0.05
Usage
1
Format
A data frame with 62 rows and 3 variables:
publicationfactor Study from where the scRNAseq data was taken from
clusterfactor Cell type or cluster
genesfactor Comma separated vector containing gene markers
Details
The markers in this database are calculated per study, that is, the data was not integrated.
brickmanlab/commonR documentation built on Dec. 19, 2021, 11:44 a.m.
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Description Usage Format Details
Description
This is a marker database of all external scRNAseq experiments in the scViz app. LFC > 1 and padj < 0.05
Usage
1 |
Format
A data frame with 62 rows and 3 variables:
publicationfactor Study from where the scRNAseq data was taken from
clusterfactor Cell type or cluster
genesfactor Comma separated vector containing gene markers
Details
The markers in this database are calculated per study, that is, the data was not integrated.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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