ggsurvpWrap: Survival plot with ggsurvplot A warpper to plot survival...

In brightchan/cjbmisc:

Description

Survival plot with ggsurvplot A warpper to plot survival plots to further customize the plot,

Usage

ggsurvpWrap(
  survdf,
  fac,
  surv.time = "OS_Month",
  surv.status = "OS_Status",
  cont.to.dis = NA,
  title = fac,
  col = comp_hm_colist_full$disc,
  risk.table = F,
  xlim = c(0, 120),
  break.time.by = 60,
  textsize = 10,
  pval.method = T,
  ...
)

Arguments

survdf	dataframe with surv.time (character or numeric) and surv.status (numeric of 0,1; or factor with Alive as base level)
fac	character of the column name in the survdf to stratify the patients
surv.time, surv.status	column name of the survival time and status in the dataframe
cont.to.dis	if fac is numeric, how to discretize it. Can be a funciton (Default median) or cutoff points (n-1 points)
col	vector of colors
xlim, break.time.by, pval.method, risk.table, ...	arguments to ggsurvplot
textsize	pass to ggplot global text size

Value

A object of class ggsurvplot

brightchan/cjbmisc documentation built on Nov. 5, 2021, 4:12 p.m.