In broadinstitute/ImagingAMARETTO: ImagingAMARETTO: tools for interpreting multi-omics networks for relevance to clinical outcomes and radiographic and histopathology imaging-derived biomarkers
Regulatory Module Heatmap Visualization
library(ComplexHeatmap)
ComplexHeatmap::draw(heatmap_module,heatmap_legend_side = "bottom",annotation_legend_side="bottom")
Activator and Repressor Driver Genes in Regulatory Module
dt_regulators
Target Genes in Regulatory Module
dt_targets
Enrichments of Functional Categories in Regulatory Module
dt_genesets
Enrichments of Driver Perturbations in Regulatory Module
dt_genesets_genetic_pert
Associations of Clinical and Molecular Phenotypes to Regulatory Module
dt_phenotype_association_mc
Associations of Imaging Phenotypes to Regulatory Module
dt_phenotype_association_img
broadinstitute/ImagingAMARETTO documentation built on Dec. 3, 2019, 6:38 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Regulatory Module Heatmap Visualization
library(ComplexHeatmap) ComplexHeatmap::draw(heatmap_module,heatmap_legend_side = "bottom",annotation_legend_side="bottom")
Activator and Repressor Driver Genes in Regulatory Module
dt_regulators
Target Genes in Regulatory Module
dt_targets
Enrichments of Functional Categories in Regulatory Module
dt_genesets
Enrichments of Driver Perturbations in Regulatory Module
dt_genesets_genetic_pert
Associations of Clinical and Molecular Phenotypes to Regulatory Module
dt_phenotype_association_mc
Associations of Imaging Phenotypes to Regulatory Module
dt_phenotype_association_img
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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