Files in brouwern/wildlifeR

Wildlife biology and animal ecology datasets with example analyses.

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

R/AOU_species_codes.R R/BBS_PA.R R/BBS_PA_SCTA.R R/BBS_PA_combo_cover_1km.R R/BBS_PA_landcover_1km.R R/NA_to_zero.R R/antlers.R R/brook_trout.R R/brook_trout_ABD.R R/combine_NLCD_classes.R R/doves_PA.R R/doves_PA_3_years.R R/eaglesOH.R R/eaglesPA.R R/eaglesUSA.R R/eaglesWV.R R/eggs.R R/eggs_and_nests.R R/eggs_and_nests2.R R/expand_BBS_routes.R R/frogarms.R R/human_bodytemp.R R/make_my_data2L.R R/milk.R R/pikas.R R/plotTukeysHSD.R R/plot_t_test_ES.R R/sample_BBS_routes.R R/sample_dove_routes.R R/trillium.R R/wetlands.R R/woodcock_MI_3_years.R

_pkgdown.yml

data/AOU_species_codes.RData

data/BBS_PA.RData

data/BBS_PA_SCTA.RData

data/BBS_PA_combo_cover_1km.RData

data/BBS_PA_landcover_1km.RData

data/antlers.RData

data/brook_trout.RData

data/brook_trout_ABD.RData

data/doves_PA.RData

data/doves_PA_3_years.RData

data/eaglesOH.RData

data/eaglesPA.RData

data/eaglesUSA.RData

data/eaglesWV.RData

data/eggs.RData

data/eggs_and_nests.RData

data/eggs_and_nests2.RData

data/frogarms.RData

data/human_bodytemp.RData

data/milk.RData

data/pikas.RData

data/trillium.RData

data/wetlands.RData

data/woodcock_MI_3_years.RData

docs/articles/ANOVA_deer_antlers.R

docs/articles/ANOVA_deer_antlers.html

docs/articles/ANOVA_deer_antlers.pdf

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-14-1.png

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-15-1.png

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-17-1.png

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docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-25-1.png

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-30-1.png

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-31-1.png

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-36-1.png

docs/articles/ANOVA_deer_antlers_files/figure-html/unnamed-chunk-37-1.png

docs/articles/Inference_by_eye.R

docs/articles/Inference_by_eye.html

docs/articles/Inference_by_eye.pdf

docs/articles/Inference_by_eye_files/figure-html/unnamed-chunk-5-1.png

docs/articles/Inference_by_eye_files/figure-html/unnamed-chunk-6-1.png

docs/articles/Inference_by_eye_files/figure-html/unnamed-chunk-8-1.png

docs/articles/Inference_by_eye_files/figure-html/unnamed-chunk-8-2.png

docs/articles/PIWO_00_05_10.csv

docs/articles/data_cleaning_dplyr_filter.html

docs/articles/index.html

docs/articles/merge_BBS_with_landcover.html

docs/articles/merge_BBS_with_landcover_files/figure-html/unnamed-chunk-11-1.png

docs/articles/merge_BBS_with_landcover_files/figure-html/unnamed-chunk-13-1.png

docs/articles/merge_BBS_with_landcover_files/figure-html/unnamed-chunk-17-1.png

docs/articles/merge_BBS_with_landcover_files/figure-html/unnamed-chunk-40-1.png

docs/articles/merge_BBS_with_landcover_files/figure-html/unnamed-chunk-41-1.png

docs/articles/reporting_paired_t_test_results.html

docs/articles/reporting_paired_t_test_results.pdf docs/articles/reporting_t_test_results.R

docs/articles/reporting_t_test_results.html

docs/articles/reporting_t_test_results.pdf

docs/articles/reporting_t_test_results_files/figure-html/unnamed-chunk-3-1.png

docs/articles/selecting_different_spp_and_landcovers.html

docs/articles/selecting_different_spp_and_landcovers_files/figure-html/unnamed-chunk-17-1.png

docs/articles/selecting_different_spp_and_landcovers_files/figure-html/unnamed-chunk-18-1.png

docs/articles/selecting_different_spp_and_landcovers_files/figure-html/unnamed-chunk-22-1.png

docs/articles/t_test_inference_by_eye.pdf

docs/articles/the_wildlifeR_package.html

docs/articles/the_wildlifeR_package.pdf

docs/articles/the_wildlifeR_package_files/figure-html/unnamed-chunk-18-1.png

docs/articles/the_wildlifeR_package_files/figure-html/unnamed-chunk-21-1.png

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docs/articles/the_wildlifeR_package_files/figure-html/unnamed-chunk-27-1.png

docs/articles/the_wildlifeR_package_files/figure-html/unnamed-chunk-43-1.png

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/AOU_species_codes.html

docs/reference/BBS_PA.html

docs/reference/BBS_PA_SCTA.html

docs/reference/BBS_PA_combo_cover_1km.html

docs/reference/BBS_PA_landcover_1km.html

docs/reference/NA_to_zero.html

docs/reference/antlers-1.png

docs/reference/antlers-10.png

docs/reference/antlers-11.png

docs/reference/antlers-12.png

docs/reference/antlers-13.png

docs/reference/antlers-14.png

docs/reference/antlers-15.png

docs/reference/antlers-2.png

docs/reference/antlers-3.png

docs/reference/antlers-4.png

docs/reference/antlers-5.png

docs/reference/antlers-6.png

docs/reference/antlers-7.png

docs/reference/antlers-8.png

docs/reference/antlers-9.png

docs/reference/antlers.html

docs/reference/brook_trout.html

docs/reference/brook_trout_ABD.html

docs/reference/combine_NLCD_classes.html

docs/reference/doves_PA.html

docs/reference/eaglesOH-1.png

docs/reference/eaglesOH.html

docs/reference/eaglesPA-1.png

docs/reference/eaglesPA.html

docs/reference/eaglesWV-1.png

docs/reference/eaglesWV.html

docs/reference/eggs-1.png

docs/reference/eggs.html

docs/reference/eggs_and_nests-1.png

docs/reference/eggs_and_nests-2.png

docs/reference/eggs_and_nests-3.png

docs/reference/eggs_and_nests-4.png

docs/reference/eggs_and_nests.html

docs/reference/eggs_and_nests2-1.png

docs/reference/eggs_and_nests2-2.png

docs/reference/eggs_and_nests2.html

docs/reference/expand_BBS_routes.html

docs/reference/human_heartrate-1.png

docs/reference/human_heartrate.html

docs/reference/index.html

docs/reference/milk.html

docs/reference/pikas-1.png

docs/reference/pikas-2.png

docs/reference/pikas-3.png

docs/reference/pikas-4.png

docs/reference/pikas-5.png

docs/reference/pikas-6.png

docs/reference/pikas.html

docs/reference/plotTukeysHSD.html

docs/reference/sample_BBS_routes.html

docs/reference/sample_dove_routes.html

docs/reference/trillium-1.png

docs/reference/trillium-2.png

docs/reference/trillium-3.png

docs/reference/trillium-4.png

docs/reference/trillium.html

docs/reference/wetlands-1.png

docs/reference/wetlands-2.png

docs/reference/wetlands-3.png

docs/reference/wetlands-4.png

docs/reference/wetlands-5.png

docs/reference/wetlands-6.png

docs/reference/wetlands.html

docs/reference/woodcock_MI_3_years-1.png

docs/reference/woodcock_MI_3_years-2.png

docs/reference/woodcock_MI_3_years-3.png

docs/reference/woodcock_MI_3_years-4.png

docs/reference/woodcock_MI_3_years-5.png

docs/reference/woodcock_MI_3_years-6.png

docs/reference/woodcock_MI_3_years.html

index.Rmd

inst/CITATION.txt

inst/extdata/Buzatto_et_al_2015_frog_arm_dimorph/Buzatto_2015_Evolution_frog_arm_dimorphism_1_no_header.csv

inst/extdata/Buzatto_et_al_2015_frog_arm_dimorph/Buzatto_2015_Evolution_frog_arm_dimorphism_2.csv

inst/extdata/Buzatto_et_al_2015_frog_arm_dimorph/Buzatto_et_al_2015_Evolution_frog_arm_dimorphism.pdf inst/extdata/Buzatto_et_al_2015_frog_arm_dimorph/Buzatto_prep_frogarm_data.Rmd

inst/extdata/Faaborg.csv

inst/extdata/Faaborg_wide.csv

inst/extdata/Medley1998.csv

inst/extdata/Medley1998.txt

inst/extdata/brook_trout_raw_data.xlsx

inst/extdata/eaglesPA.csv

inst/extdata/eaglesPA.xlsx

inst/extdata/eaglesUSA.csv

inst/extdata/eaglesWV.csv

inst/extdata/human_heartrate.csv

inst/extdata/land_cover_classes.xlsx

inst/extdata/pikas.csv

inst/extdata/scripts/PA_eagles_load_by_hand.R

inst/extdata/term_paper_materials/Assignment_details_script_sample_plots_exploratory_graphs.docx

inst/extdata/term_paper_materials/ENS 495 Independent Data Analysis Assignment 2017.docx

inst/extdata/term_paper_materials/Example R script for reproducible analysis.pdf

inst/extdata/term_paper_materials/assignment_details_DRAFT/Assignment_details_script_sample_plots_exploratory_graphs.docx

inst/extdata/term_paper_materials/assignment_details_DRAFT/ENS 495 Independent Data Analysis Assignment 2017.docx

inst/extdata/term_paper_materials/reproducible_analysis_script_full_wildlifeR_workflow/reproducible_analysis_script_full_wildlifeR_workflow..docx

inst/extdata/term_paper_materials/reproducible_analysis_script_full_wildlifeR_workflow/reproducible_analysis_script_full_wildlifeR_workflow..pdf inst/extdata/term_paper_materials/reproducible_analysis_script_full_wildlifeR_workflow/reproducible_analysis_script_full_wildlifeR_workflow.R inst/extdata/term_paper_materials/term_paper_example_outline.Rmd inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_ANOVA_example/BROUWER_NL_term_paper_ANOVA_example_PIWO_vs_time.Rmd

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_ANOVA_example/BROUWER_NL_term_paper_ANOVA_example_PIWO_vs_time.docx

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_ANOVA_example/BROUWER_NL_term_paper_ANOVA_example_PIWO_vs_time.pdf inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_ANOVA_example/Brouwer_NL_analysis_script_PIWO_00_05_10.R

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_ANOVA_example/PIWO_00_05_10.csv

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_ANOVA_example/example_script_ANOVA.pdf inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/BROUWER_NL_analysis_script_PIWO_vs_forest_cover.Rmd

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/BROUWER_NL_analysis_script_PIWO_vs_forest_cover.docx

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/BROUWER_NL_analysis_script_PIWO_vs_forest_cover.pdf inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/BROUWER_NL_term_paper_regressio_example_PIWO_vs_forest_cover.Rmd inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/BROUWER_NL_term_paper_regressio_example_PIWO_vs_forest_cover.pdf

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/Brouwer_NL_PIWO_vs_forest_cover.csv

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/Brouwer_NL_analysis_script_PIWO_vs_forest_cover.R

inst/extdata/term_paper_materials/term_paper_example_submissions/term_paper_regression_example/term_paper_regression_example.html

inst/extdata/term_paper_materials/term_paper_outline.docx

man/AOU_species_codes.Rd man/BBS_PA.Rd man/BBS_PA_SCTA.Rd man/BBS_PA_combo_cover_1km.Rd man/BBS_PA_landcover_1km.Rd man/NA_to_zero.Rd man/antlers.Rd man/brook_trout.Rd man/brook_trout_ABD.Rd man/combine_NLCD_classes.Rd man/doves_PA.Rd man/eaglesOH.Rd man/eaglesPA.Rd man/eaglesWV.Rd man/eggs.Rd man/eggs_and_nests.Rd man/eggs_and_nests2.Rd man/expand_BBS_routes.Rd man/frogarms.Rd man/human_bodytemp.Rd man/make_my_data2L.Rd man/milk.Rd man/pikas.Rd man/plotTukeysHSD.Rd man/plot_t_test_ES.Rd man/sample_BBS_routes.Rd man/sample_dove_routes.Rd man/trillium.Rd man/wetlands.Rd man/woodcock_MI_3_years.Rd vignettes/1st_encounter_w_data_a_summary_stats.Rmd vignettes/1st_encounter_w_data_b_graphs.Rmd vignettes/1st_encounter_w_data_c_t_test.Rmd vignettes/ANOVA_deer_antlers.R vignettes/ANOVA_deer_antlers.Rmd

vignettes/ANOVA_deer_antlers.html

vignettes/Inference_by_eye.R vignettes/Inference_by_eye.Rmd

vignettes/Inference_by_eye.html

vignettes/PIWO_00_05_10.csv

vignettes/data_cleaning_dplyr_filter.R vignettes/data_cleaning_dplyr_filter.Rmd

vignettes/data_cleaning_dplyr_filter.html

vignettes/merge_BBS_with_landcover.R vignettes/merge_BBS_with_landcover.Rmd

vignettes/merge_BBS_with_landcover.html

vignettes/reporting_paired_t_test_results.R vignettes/reporting_paired_t_test_results.Rmd

vignettes/reporting_paired_t_test_results.html

vignettes/reporting_t_test_results.R vignettes/reporting_t_test_results.Rmd

vignettes/reporting_t_test_results.html

vignettes/selecting_different_spp_and_landcovers.R vignettes/selecting_different_spp_and_landcovers.Rmd

vignettes/selecting_different_spp_and_landcovers.html

vignettes/the_wildlifeR_package.R vignettes/the_wildlifeR_package.Rmd

vignettes/the_wildlifeR_package.html

wildlifeR.Rproj

brouwern/wildlifeR documentation built on May 28, 2019, 7:13 p.m.