generateGraph: Generate the graph visualization of GO enrichment scores

In brucosper/RadialGO: A Radial Tree Visualization of Gene Ontology Enrichment

Description

Generate the graph visualization of GO enrichment scores

Usage

generateGraph(scores, top, cutoff)

Arguments

scores	A named numeric vector with GO IDs and corresponding scores
top	The number of nodes to use when generating the subgraph
cutoff	The cutoff to be used for hiding nodes

Value

A graph object to be used with render_graph()

Examples

## Not run: 
scores <- c(0.5, 0.2, 0.001)
names(scores) <- c("GO:0008150", "GO:1901360", "GO:0006139")
generateGraph(scores, 2, 0.3)

## End(Not run)

brucosper/RadialGO documentation built on Dec. 8, 2019, 10:32 a.m.