getSubgraphNodes: Generate the subgraph implied by the list of nodes passed in.
In brucosper/RadialGO: A Radial Tree Visualization of Gene Ontology Enrichment
Description
Usage
Arguments
Value
Examples
Description
Generate the subgraph implied by the list of nodes passed in.
Usage
1
getSubgraphNodes(enrichment_results)
Arguments
enrichment_results
A named numerical vector containing GO IDs as names
and the corresponding score
Value
A data frame containing one column, named "id", with the nodes needed
for building the graph
Examples
1
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3
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5
6
## Not run:
scores <- c(0.5, 0.2, 0.001)
names(scores) <- c("GO:0008150", "GO:1901360", "GO:0006139")
getSubgraphNodes(scores)
## End(Not run)
brucosper/RadialGO documentation built on Dec. 8, 2019, 10:32 a.m.
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Description Usage Arguments Value Examples
Description
Generate the subgraph implied by the list of nodes passed in.
Usage
1 | getSubgraphNodes(enrichment_results)
|
Arguments
enrichment_results |
A named numerical vector containing GO IDs as names and the corresponding score |
Value
A data frame containing one column, named "id", with the nodes needed for building the graph
Examples
1 2 3 4 5 6 | ## Not run:
scores <- c(0.5, 0.2, 0.001)
names(scores) <- c("GO:0008150", "GO:1901360", "GO:0006139")
getSubgraphNodes(scores)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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