parallelnh_LINUX: Parallel NewHybrids - LINUX version

Description Usage Arguments Author(s) References

Description

paralllelnh_OSX is the LINUX (Ubuntu) version of the function thatallows NewHybrids (Anderson and Thompson 2002) to be run in parallel. It does so by creating a vector of file names to be run, that are held within a single folder. paralleleNH_LINUX then assigns a job to each of the cores available in the computer. As each task finishes, parallelnh_LINUX assigns a new analysis to the idle core.

Usage

1
parallelnh_LINUX(folder.data, where.NH, burnin, sweeps)

Arguments

folder.data

A file path to the folder in which the NewHybrids formatted files to be analyzed, and their associated individual file, reside. Note the path provided must end in "/"

where.NH

A file path to the NewHybrids installation folder. Note this folder must be named "newhybrids", and the path provided must end in "/"

burnin

An integer specifying how many burnin steps NewHybrids is to run

sweeps

An integer specifying how many sweep steps NewHybrids is to run

Author(s)

Brendan Wringe bwringe@gmail.com

References

Anderson EC, Thompson EA. A model-based method for identifying species hybrids using multilocus genetic data. Genetics. Genetics Society of America; 2002;160: 1217-1229.


bwringe/parallelnewhybrid documentation built on May 13, 2019, 9:24 a.m.