Description Usage Arguments Author(s) References
paralllelnh_OSX
allows NewHybrids (Anderson and Thompson 2002) to be run in parallel. It does so by creating a vector of file names to be run, that are held within a single folder. paralleleNH_OSX then assigns a job to each of the cores available in the computer. As each task finishes, parallelnh_OSX assigns a new analysis to the idle core.
1 | parallelnh_OSX(folder.data, where.NH, burnin, sweeps)
|
folder.data |
A file path to the folder in which the NewHybrids formatted files to be analyzed, and their associated individual file, reside. Note the path provided must end in "/" |
where.NH |
A file path to the NewHybrids installation folder. Note this folder must be named "newhybrids", and the path provided must end in "/" |
burnin |
An integer specifying how many burnin steps NewHybrids is to run |
sweeps |
An integer specifying how many sweep steps NewHybrids is to run |
Brendan Wringe bwringe@gmail.com
Anderson EC, Thompson EA. A model-based method for identifying species hybrids using multilocus genetic data. Genetics. Genetics Society of America; 2002;160: 1217-1229.
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