markerlrt: General likelihood ratio test for association between marker...
In byandell/qtl: Tools for analyzing QTL experiments
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Calculate a LOD score for a general likelihood ratio test for each
pair of markers, to assess their association.
Usage
1
markerlrt(cross)
Arguments
cross
An object of class cross. See
read.cross for details.
Value
The input cross object is returned with a component, rf,
added. This is a matrix of size (tot.mar x tot.mar). The diagonal
contains the number of typed meioses per marker, the upper and lower triangles
each contain the LOD scores.
Author(s)
Karl W Broman, kbroman@biostat.wisc.edu
See Also
Examples
1
2
3
byandell/qtl documentation built on May 13, 2019, 9:28 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Calculate a LOD score for a general likelihood ratio test for each pair of markers, to assess their association.
Usage
1 | markerlrt(cross)
|
Arguments
cross |
An object of class |
Value
The input cross object is returned with a component, rf,
added. This is a matrix of size (tot.mar x tot.mar). The diagonal
contains the number of typed meioses per marker, the upper and lower triangles
each contain the LOD scores.
Author(s)
Karl W Broman, kbroman@biostat.wisc.edu
See Also
Examples
1 2 3 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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