cmp.rf: Compare values for two objects created by est.rf.
In byandell/qtlbcsft: Tools for testing QTL BCsFt calculations

Description Usage Arguments Details Value Author(s) See Also Examples

Detailed comparison of two objects created by est.rf.

1	cmp.rf(rf1, rf2, tol = 1e-06)

`rf1`	Recombination frequency (between 0 and 0.5).
`rf2`	Recombination frequency (between 0 and 0.5).
`tol`	Tolerance level.

Comparison of summaries and pattern of missing and zero values for matrix that contains number of meioses in diagonal, LOD above diagonal, and rf below diagonal.

List with values

`lod.diff`	Matrix showing row, column and LOD values that differ
`rf.diff`	Matrix showing row, column and rf values that differ

Brian S. Yandell <byandell@wisc.edu> and Laura Shannon.

est.rf, plot.rf

data(fake.f2)
fake.ft <- fake.f2
class(fake.ft)[1] <- "bcsft"
attr(fake.ft, "scheme") <- c(0,2)
rf.f2 <- est.rf(fake.f2)
rf.ft <- est.rf(fake.ft)
cmp.rf(rf.f2,rf.ft)