CPTAC_HNSC: Protein Abundance data from HNSC

In califano-lab/NaRnEA: Nonparametric analytical Rank-based Enrichment Analysis - An Information Theoretic Framework for Protein Activity Measurement

Protein Abundance data from HNSC

Description

Protein abundance data downloaded from Clinical Proteomic Tumor Analysis Consortium (CPTAC) for head and neck squamous cell carcinoma (HNSC). Data contains protein abundances for 9,666 proteins in 63 normal tissue samples and 109 tumor samples. Proteins are in rows and samples are in columns. Protein are labeled with Hugo IDs.

Usage

data(CPTAC_HNSC)

Format

A list with 'tissue' and 'tumor' elements, each a data.frame object.

Source

Downloaded from CPTAC

Examples

data(CPTAC_HNSC)
dim(CPTAC_HNSC)

califano-lab/NaRnEA documentation built on March 10, 2023, 7:18 p.m.