LUAD_ges: LUAD GES Vector
In califano-lab/NaRnEA: Nonparametric analytical Rank-based Enrichment Analysis - An Information Theoretic Framework for Protein Activity Measurement
LUAD_ges R Documentation
LUAD GES Vector
Description
Gene expression signature calculated via tumor-vs-normal Mann-Whitney U-Test.
This object can be used to run the simplified vignette in the NaRnEA README.
For full instructions on how to generate this object, see the full LUAD vignette.
Genes in are labeled with Entrez IDs.
Usage
data(LUAD_ges)
Format
Two objects: LUAD.regulon.list, a list of regulon objects, each with parametrized network targets generated from ARACNe3;
and LUAD.mwu.ges, a vector of GES values for the tumor-vs-normal GES.
Source
Objects generated from TCGA LUAD data.
Examples
data(LUAD_ges)
dim(LUAD_ges)
califano-lab/NaRnEA documentation built on March 10, 2023, 7:18 p.m.
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| LUAD_ges | R Documentation |
LUAD GES Vector
Description
Gene expression signature calculated via tumor-vs-normal Mann-Whitney U-Test. This object can be used to run the simplified vignette in the NaRnEA README. For full instructions on how to generate this object, see the full LUAD vignette. Genes in are labeled with Entrez IDs.
Usage
data(LUAD_ges)
Format
Two objects: LUAD.regulon.list, a list of regulon objects, each with parametrized network targets generated from ARACNe3;
and LUAD.mwu.ges, a vector of GES values for the tumor-vs-normal GES.
Source
Objects generated from TCGA LUAD data.
Examples
data(LUAD_ges) dim(LUAD_ges)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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