combine_nes: Generates a final NES from the combination of the Directed...

In califano-lab/NaRnEA: Nonparametric analytical Rank-based Enrichment Analysis - An Information Theoretic Framework for Protein Activity Measurement

Generates a final NES from the combination of the Directed and Undirected NES.

Description

Generates a final NES from the combination of the Directed and Undirected NES.

Usage

combine_nes(D.nes, U.nes, COV.nes)

Arguments

D.nes	NES scores for the directed enrichment (regulons x samples).
U.nes	NES scores for the undirected enrichment (regulons x samples).
COV.nes	Covariance of the undirected and directed enrichment NES (regulons x samples).

Value

Matrix of integrated NES scores (regulons x samples).

califano-lab/NaRnEA documentation built on March 10, 2023, 7:18 p.m.