Man pages for campsj/scTools
Tools to help with analysis of single-cell transcriptome datasets
| export_markers | Filter and save markers |
| extract_PC_gene_weights | Extract principal component gene weights |
| loop_gene_PC | Loop over genes and components vector |
| plot_cell_trajectory | Plots the minimum spanning tree on cells. |
| plot_dims | Plot reduced dimensions |
| plot_expression | Plot expression |
| plot_on_PCA | Plot on PCA |
| plot_regulon | Plot regulon activity on PCA |
| save_PC_gene_weights | Save Principal component weights |
| save_pheatmap_tiff | Save heatmap |
| scTools_theme_opts | Standard plotting theme |
| select_markers | Select markers |
