Description Usage Arguments Value References Examples
This package is easy to use and can be helpful to calculate deregressed proofs, and their reliabilities and weights.
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animalData |
It is animal data file |
parentData |
It is parents data file |
animalCol |
It is the name of the animal's column |
sireCol |
It is the name of the animal's dam column |
damCol |
It is the name of the animal's dam column |
parentCol |
It the name of the parents' column in the parents data file |
ebvName |
It is the name of the EBV column |
r2Name |
It is the name of the accuracy column |
c |
It is the fraction of genetic variance not explained by markers |
h2 |
It the heritability of the trait |
A data frame with deregressed proofs, reliability and weights.
Garrick, D. J., J. F. Taylor, and R. L. Fernando. 2009. Deregressing estimated breeding values and weighting information for genomic regression analyses. Genet. Sel. Evol. 41:55.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | ## Not to run ##
## Example from Garrick et al., (2009)
animalData=data.frame(ID="Animal", sire="Sire", dam="Dam", EBV=15, r2=0.68)
parentData=data.frame(ID=c("Sire", "Dam"), EBV=c(10, 2), r2=c(0.97, 0.36))
DRP2files(animalData=animalData,
parentData=parentData,
animalCol = "ID",
sireCol = "sire",
damCol = "dam",
parentCol = "ID",
ebvName = "EBV",
r2Name = "r2",
c = 0.5,
h2 = 0.25)
## End(Not run)
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