compute_freq_alt: Computes frequency of alteration (fraction of non-zeroes)
In cannin/tumorcomparer: Compare Patient Samples to Cell Line Models Using Molecular Data and Weighted Similarity
View source: R/compute_freq_alt.R
compute_freq_alt R Documentation
Computes frequency of alteration (fraction of non-zeroes)
Description
Computes frequency of alteration (fraction of non-zeroes)
Usage
compute_freq_alt(alt_mat)
Arguments
alt_mat
a matrix or vector of discrete values - 0s represent unaltered, non-zeroes altered
Value
the fraction of non-zeroes, (i.e. altered features/genes)
Author(s)
Rileen Sinha (rileen@gmail.com), Augustin Luna (aluna@jimmy.harvard.edu)
Examples
set.seed(1)
tmp <- sample(c(0, 1), 100, replace=TRUE)
mat <- matrix(tmp, 10, 10)
compute_freq_alt(mat)
cannin/tumorcomparer documentation built on Feb. 7, 2023, 3:13 p.m.
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View source: R/compute_freq_alt.R
| compute_freq_alt | R Documentation |
Computes frequency of alteration (fraction of non-zeroes)
Description
Computes frequency of alteration (fraction of non-zeroes)
Usage
compute_freq_alt(alt_mat)
Arguments
alt_mat |
a matrix or vector of discrete values - 0s represent unaltered, non-zeroes altered |
Value
the fraction of non-zeroes, (i.e. altered features/genes)
Author(s)
Rileen Sinha (rileen@gmail.com), Augustin Luna (aluna@jimmy.harvard.edu)
Examples
set.seed(1) tmp <- sample(c(0, 1), 100, replace=TRUE) mat <- matrix(tmp, 10, 10) compute_freq_alt(mat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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