default_SBATCH_config: Deafult SLURM setting to submit array jobs to SLURM clusters.

In caravagn/easypar: Easy parallaleization of R functions.

Deafult SLURM setting to submit array jobs to SLURM clusters.

Description

Deafult SBATCH setting to submit array jobs to LSF clusters. This is handy to obtain a default input, and implement custom modificiations. These parameters are to be used by function run_slurm.

Usage

default_SBATCH_config(
  job = "EASYPAR_Runner",
  partition = "cpuq",
  n = 1,
  cpus = 16,
  A = "",
  time = "3:00:00",
  o = "log/output.%A-%a.log",
  mem = "1040M"
)

Value

A named list of SBATCH settings.

See Also

run_lsf

Examples

custom_SBATCH = default_SBATCH_config(time = '12:00')
custom_SBATCH$`-nodes` = 10
custom_SBATCH$`--partition` = "my_queue"

caravagn/easypar documentation built on June 4, 2022, 4:25 a.m.