plot_bootstrap_model_frequency: Plot the boostrapped model frequency

In caravagnalab/mobster: MOBSTER - Model-based tumour subclonal deconvolution

Plot the boostrapped model frequency

Description

From the results of a call to mobster_boostrap, and the results of a call to bootstrapped_statistics, a barplot with the model frequency is produced

Usage

plot_bootstrap_model_frequency(bootstrap_results, bootstrap_statistics)

Arguments

bootstrap_results	Results of a call to mobster_boostrap.
bootstrap_statisticsResults	of a call to bootstrapped_statistics.

Value

A barplot of the boostrapped model frequency

Examples

# Random small dataset
dataset = random_dataset(N = 200, seed = 123, Beta_variance_scaling = 100)
x = mobster_fit(dataset$data, auto_setup = 'FAST')

# Just 5 resamples of a nonparametric bootstrap run, disabling the parallel engine
options(easypar.parallel = FALSE)
boot_results = mobster_bootstrap(x$best, n.resamples = 5, auto_setup = 'FAST')

boot_stats = bootstrapped_statistics(x$best, boot_results)
plot_bootstrap_model_frequency(boot_results, boot_stats)

caravagnalab/mobster documentation built on March 25, 2023, 3:40 p.m.