mtraceR | R Documentation |
mtraceR
can be used to visualise trace of MCMC chains, calculate
Effective Sample Size (ESS), Gelman and Rubin's convergence diagnostic (and
plots) or Bayes factor, and generate skyline plots.
The main function mtrace
is essentially a wrapper for the R package
coda
optimised for migrate-n outputs. It is intended to facilitate and
speed up post-analysis data processing.
COMPLETE DESCRIPTION/DETAILS
Use help(package = "mtraceR")
for a list of mtraceR
functions
and their specific documentations.
A more detailed description of the package and functions can be opened with:
vignette(package="mtraceR", topic="mtraceR-package")
.
More vignettes may be come available in the future. Use
vignette(package="mtraceR")
to see all the available vignettes.
If you use mtraceR
, please cite:
...
Please, use https://github.org/carlopacioni/mtraceR/issues to report
any issues with mtraceR
. If unsure, or for feedback, contact us at:
carlo.pacioni 'at' gmail.com or anders???.
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