sRNA_prob: Computes the probability of a sequence beloning to a certain...
In carltonyfakhry/InvenireSRNA: Invenire Small RNA
Description
Usage
Arguments
Value
Description
This function computes the probability of a given sequence belonging
to a certain class of sRNA.
Usage
1
Arguments
rna_sequence
RNA Sequence constructed with nucleotides A,C,G,T and U.
InvenireSRNA_model
object of class InvenireSRNA to be used for prediction.
If InvenireSRNA_model = NULL then the pretrained
model to predict CsrA regulating sRNAs is used.
Value
The functions returns a list containing the following elements:
probability probability of the given sequence belonging to a given class of sRNA.
std_deviation the standard deviation of the prediction.
carltonyfakhry/InvenireSRNA documentation built on May 13, 2019, 12:49 p.m.
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Description Usage Arguments Value
Description
This function computes the probability of a given sequence belonging to a certain class of sRNA.
Usage
1 |
Arguments
rna_sequence |
RNA Sequence constructed with nucleotides A,C,G,T and U. |
InvenireSRNA_model |
object of class InvenireSRNA to be used for prediction. If InvenireSRNA_model = NULL then the pretrained model to predict CsrA regulating sRNAs is used. |
Value
The functions returns a list containing the following elements:
probability probability of the given sequence belonging to a given class of sRNA.
std_deviation the standard deviation of the prediction.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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