plot_propensity: Plot continuous phenotype scores from fit_banyan()
In carter-allen/banyan: Bayesian network analysis of spatially resolved single cell data
View source: R/plot_propensity.R
plot_propensity R Documentation
Plot continuous phenotype scores from fit_banyan()
Description
This function allows you to visualize continuous propensity of each cell spot towards each sub-population (e.g., continuous phenoptypes) after running fit_banyan() and get_scores()
Usage
plot_propensity(fit, k = 1)
Arguments
fit
A list returned by fit_banyan(). Must have slots named "coords" and "C_scores".
k
Which cell sub-population to compute propensity towards
Value
A ggplot object
carter-allen/banyan documentation built on Nov. 30, 2022, 11:58 p.m.
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View source: R/plot_propensity.R
| plot_propensity | R Documentation |
Plot continuous phenotype scores from fit_banyan()
Description
This function allows you to visualize continuous propensity of each cell spot towards each sub-population (e.g., continuous phenoptypes) after running fit_banyan() and get_scores()
Usage
plot_propensity(fit, k = 1)
Arguments
fit |
A list returned by fit_banyan(). Must have slots named "coords" and "C_scores". |
k |
Which cell sub-population to compute propensity towards |
Value
A ggplot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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