carter-allen/dpeak: dPeak (Deconvolution of Peaks in ChIP-seq Analysis)

dPeak is a statistical framework for the high resolution identification of protein-DNA interaction sites using PET and SET ChIP-Seq and ChIP-exo data. It provides computationally efficient and user friendly interface to process ChIP-seq and ChIP-exo data, implement exploratory analysis, fit dPeak model, and export list of predicted binding sites for downstream analysis.

Getting started

Package details

AuthorDongjun Chung, Carter Allen
Bioconductor views ChIPSeq Genetics Sequencing Software Transcription
MaintainerDongjun Chung <>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
carter-allen/dpeak documentation built on April 23, 2020, 4:09 p.m.