Description Usage Format References

A sample KSEA.Scores output generated from the KSEA.Scores() function (or alternatively, the "KSEA Kinase Scores.csv" output from the KSEA.Complete() function, loaded into R)

1 |

dataframe containing 7 columns in the exact order as listed below.

"KinaseGene" the HUGO gene name of the kinase

"mS" the mean log2FC of all the kinase's identified substrates

"Enrichment" the enrichment score (refer to Casado et al. (2013) Sci. Signal., 6, rs6-rs6)

"m" the number of experimentally-identifed substrates annotating to that kinase

"z.score" the normalized kinase score

"p.value" the statistical assessment of the kinase score

"FDR" the p-value adjusted for multiple hypothesis testing by the Benjamin-Hochberg method

unpublished data

casecpb/KSEAapp documentation built on June 1, 2017, 5:23 p.m.

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.