Files in caseywdunn/hutan
A Collection of Tools for Phylogenetic Tree Manipulation
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md
R/hutan.R
R/siphonophore_constraint.R
R/siphonophore_ml.R
R/utility_functions.R
README.md
cran-comments.md
data/siphonophore_constraint.rda
data/siphonophore_ml.rda
hutan-manual.pdf
hutan.Rproj
inst/CITATION
man/ancestral_edges.Rd
man/are_bipartitions_compatible.Rd
man/bipartition_for_edge.Rd
man/bipartition_for_edge_by_label.Rd
man/calc_diffs.Rd
man/compatible_edges.Rd
man/connecting_edges.Rd
man/cut_tree.Rd
man/decompose_tree.Rd
man/descendants.Rd
man/difference_from_calibrated.Rd
man/distance_from_tip.Rd
man/extend_terminal_branches.Rd
man/flip_bipartition.Rd
man/generate_constaint_tree.Rd
man/get_bipartitions.Rd
man/get_corresponding_nodes.Rd
man/hutan.Rd
man/is_compatible_with_set.Rd
man/is_monophyletic.Rd
man/picx.Rd
man/safe.drop.tip.Rd
man/sim_diffs.Rd
man/siphonophore_constraint.Rd
man/siphonophore_ml.Rd
man/slide_root_edges.Rd
man/tip_descendants.Rd
man/tips.Rd
man/zero_constrained.Rd
tests/testthat.R
tests/testthat/test_general.R
tests/testthat/test_picx.R
vignettes/hutan-vignette.Rmd
vignettes/picx.Rmd
