Survival Analysis for Pathways

cliqueSurvivalTest | Perform survival test on all the cliques of the graph |

computeDays | Function to compute days |

exp | Expression dataset |

getTopLoadGenes | Extract the relevant genes associated with survival |

graph | An example graphNEL |

pathwaySurvivalTest | Survival analysis on the whole pathway |

pcsSurvCox | Cox Analysis on Principal Components |

survAnnot | Anotations |

survClasses | Survival Cliques Class |

survivalcox | Cox Model Analysis |

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